McCarthy, Shane A.: search on Z-Library

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1

Insights into human genetic variation and population history from 929 diverse genomes

BergstrÃ¶m, Anders, McCarthy, Shane A., Hui, Ruoyun, Almarri, Mohamed A., Ayub, Qasim, Danecek, Petr, Chen, Yuan, Felkel, Sabine, Hallast, Pille, Kamm, Jack, BlanchÃ©, HÃ©lÃ¨ne, Deleuze, Jean-FranÃ§oi

Journal:

Year:

2020

Language:

english

File:

PDF, 1.63 MB

english, 2020

2

Punctuated bursts in human male demography inferred from 1,244 worldwide Y-chromosome sequences

Poznik, G David, Xue, Yali, Mendez, Fernando L, Willems, Thomas F, Massaia, Andrea, Wilson Sayres, Melissa A, Ayub, Qasim, McCarthy, Shane A, Narechania, Apurva, Kashin, Seva, Chen, Yuan, Banerjee, Ru

Journal:

Nature Genetics

Year:

2016

Language:

english

File:

PDF, 1.52 MB

english, 2016

3

The UK10K project identifies rare variants in health and disease

Walter, Klaudia, Min, Josine L., Huang, Jie, Crooks, Lucy, Memari, Yasin, McCarthy, Shane, Perry, John R. B., Xu, ChangJiang, Futema, Marta, Lawson, Daniel, Iotchkova, Valentina, Schiffels, Stephan, H

Journal:

Year:

2015

Language:

english

File:

PDF, 4.45 MB

english, 2015

4

A reference panel of 64,976 haplotypes for genotype imputation

McCarthy, Shane, Das, Sayantan, Kretzschmar, Warren, Delaneau, Olivier, Wood, Andrew R, Teumer, Alexander, Kang, Hyun Min, Fuchsberger, Christian, Danecek, Petr, Sharp, Kevin, Luo, Yang, Sidore, Carlo

Journal:

Nature Genetics

Year:

2016

Language:

english

File:

PDF, 623 KB

english, 2016

5

Rehydration behaviour of spray-dried micellar casein concentrates produced using microfiltration of skim milk at cold or warm temperatures

Crowley, Shane V., Burlot, Esther, Silva, Juliana V.C., McCarthy, Noel A., Wijayanti, Heni B., Fenelon, Mark A., Kelly, Alan L., O’Mahony, James A.

Journal:

International Dairy Journal

Year:

2018

Language:

english

File:

PDF, 1.70 MB

english, 2018

6

Pilot-scale ceramic membrane filtration of skim milk for the production of a protein base ingredient for use in infant milk formula

McCarthy, Noel A., Wijayanti, HeniBudi, Crowley, Shane V., O’Mahony, James A., Fenelon, Mark A.

Journal:

International Dairy Journal

Year:

2017

Language:

english

File:

PDF, 1.47 MB

english, 2017

7

Effect of processing options on ultra-low-loss lead–magnesium–niobium titanate thin films for high density capacitors

Chen, Wenbin, McCarthy, Kevin G., O'Brien, Shane, Çopuroğlu, Mehmet, Cai, Miao, Winfield, Richard, Mathewson, Alan

Journal:

Thin Solid Films

Year:

2013

Language:

english

File:

PDF, 623 KB

english, 2013

8

Eosinophilic Granuloma of the Atlas Presenting as Torticollis in a Child

Ngu, Bonaventure B., Khanna, A. Jay, Pak, Shane S., McCarthy, Edward F., Sponseller, Paul D.

Journal:

Year:

2004

Language:

english

File:

PDF, 554 KB

english, 2004

9

Reference-based phasing using the Haplotype Reference Consortium panel

Loh, Po-Ru, Danecek, Petr, Palamara, Pier Francesco, Fuchsberger, Christian, A Reshef, Yakir, K Finucane, Hilary, Schoenherr, Sebastian, Forer, Lukas, McCarthy, Shane, Abecasis, Goncalo R, Durbin, Ric

Journal:

Nature Genetics

Year:

2016

Language:

english

File:

PDF, 556 KB

english, 2016

10

Temperature behavior of electrical properties of high-k lead–magnesium–niobium titanate thin-films

Wenbin Chen, Kevin G. McCarthy, Mehmet Çopuroğlu, Shane O'Brien, Richard Winfield, Alan Mathewson

Journal:

Thin Solid Films

Year:

2012

Language:

english

File:

PDF, 633 KB

english, 2012

11

Neurosystems: brain rhythms and cognitive processing

Cannon, Jonathan, McCarthy, Michelle M., Lee, Shane, Lee, Jung, Börgers, Christoph, Whittington, Miles A., Kopell, Nancy

Journal:

European Journal of Neuroscience

Year:

2014

Language:

english

File:

PDF, 1.52 MB

english, 2014

12

A recurrent 16p12.1 microdeletion supports a two-hit model for severe developmental delay

Girirajan, Santhosh, Rosenfeld, Jill A, Cooper, Gregory M, Antonacci, Francesca, Siswara, Priscillia, Itsara, Andy, Vives, Laura, Walsh, Tom, McCarthy, Shane E, Baker, Carl

Journal:

Nature Genetics

Year:

2010

Language:

english

File:

PDF, 772 KB

english, 2010

13

[IEEE 2010 International Conference on Microelectronic Test Structures (ICMTS) - Hiroshima, Japan (2010.03.22-2010.03.25)] 2010 International Conference on Microelectronic Test Structures (ICMTS) - Electrical characterization of novel PMNT thin-films

Chen, Wenbin, McCarthy, Kevin G., Copuroglu, Mehmet, O'Brien, Shane, Winfield, Richard, Mathewson, Alan

Year:

2010

Language:

english

File:

PDF, 139 KB

english, 2010

14

Improved imputation of low-frequency and rare variants using the UK10K haplotype reference panel

Huang, Jie, Howie, Bryan, McCarthy, Shane, Memari, Yasin, Walter, Klaudia, Min, Josine L., Danecek, Petr, Malerba, Giovanni, Trabetti, Elisabetta, Zheng, Hou-Feng, Al Turki, Saeed, Amuzu, Antoinette,

Journal:

Nature Communications

Year:

2015

Language:

english

File:

PDF, 486 KB

english, 2015

15

Tunable Transcriptional Interference at the Endogenous Alcohol Dehydrogenase Gene Locus in Drosophila melanogaster

Jorgensen, Victoria, Chen, Jingxun, Vander Wende, Helen, Harris, Devon E., McCarthy, Alicia, Breznak, Shane, Wong-Deyrup, Siu Wah, Chen, Yuzhang, Rangan, Prashanth, Brar, Gloria Ann, Sawyer, Eric M.,

Journal:

G3 Genes|Genome|Genetics

Year:

2020

File:

PDF, 1.19 MB

2020

16

Modeling a whole organ using proteomics: The avian bursa of Fabricius

Fiona M. McCarthy, Amanda M. Cooksey, Nan Wang, Susan M. Bridges, G. Todd Pharr, Shane C. Burgess

Journal:

Year:

2006

Language:

english

File:

PDF, 979 KB

english, 2006

17

Duplications of the neuropeptide receptor gene VIPR2 confer significant risk for schizophrenia

Vacic, Vladimir, McCarthy, Shane, Malhotra, Dheeraj, Murray, Fiona, Chou, Hsun-Hua, Peoples, Aine, Makarov, Vladimir, Yoon, Seungtai, Bhandari, Abhishek, Corominas, Roser

Journal:

Year:

2011

Language:

english

File:

PDF, 292 KB

english, 2011

18

Erythropoietin-Stimulated Raf-1 Tyrosine Phosphorylation Is Associated with the Tyrosine Kinase Lyn in J2E Erythroleukemic Cells

Peta A. Tilbrook, Shane M. Colley, David J. McCarthy, Richard Marais, S.Peter Klinken

Journal:

Archives of Biochemistry and Biophysics

Year:

2001

Language:

english

File:

PDF, 200 KB

english, 2001

19

Understanding animal viruses using the Gene Ontology

Fiona M. McCarthy, Timothy J. Mahony, Mark S. Parcells, Shane C. Burgess

Journal:

Trends in Microbiology

Year:

2009

Language:

english

File:

PDF, 252 KB

english, 2009

20

Whole-genome view of the consequences of a population bottleneck using 2926 genome sequences from Finland and United Kingdom

Chheda, Himanshu, Palta, Priit, Pirinen, Matti, McCarthy, Shane, Walter, Klaudia, Koskinen, Seppo, Salomaa, Veikko, Daly, Mark, Durbin, Richard, Palotie, Aarno, Aittokallio, Tero, Ripatti, Samuli

Journal:

European Journal of Human Genetics

Year:

2017

Language:

english

File:

PDF, 1.27 MB

english, 2017

21

Enrichment of low-frequency functional variants revealed by whole-genome sequencing of multiple isolated European populations

Xue, Yali, Mezzavilla, Massimo, Haber, Marc, McCarthy, Shane, Chen, Yuan, Narasimhan, Vagheesh, Gilly, Arthur, Ayub, Qasim, Colonna, Vincenza, Southam, Lorraine, Finan, Christopher, Massaia, Andrea, C

Journal:

Nature Communications

Year:

2017

Language:

english

File:

PDF, 1008 KB

english, 2017

22

Rare structural variants in schizophrenia: one disorder, multiple mutations; one mutation, multiple disorders

Jonathan Sebat, Deborah L. Levy, Shane E. McCarthy

Journal:

Trends in Genetics

Year:

2009

Language:

english

File:

PDF, 263 KB

english, 2009

23

Power-weighted densities for time series data

McCarthy, Daniel, Jensen, Shane T.

Journal:

The Annals of Applied Statistics

Year:

2016

Language:

english

File:

PDF, 474 KB

english, 2016

24

When does the non-variational nature of second-order Møller-Plesset energies manifest itself? All-electron correlation energies for open-shell atoms from K to Br

McCarthy, Shane P., Thakkar, Ajit J.

Journal:

The Journal of Chemical Physics

Year:

2012

Language:

english

File:

PDF, 387 KB

english, 2012

25

BEYOND THE TRANSLOCATION: WHOLE GENOME SEQUENCING ANALYSIS OF THE SCOTTISH T(1;11) FAMILY

Ryan, Niamh, Lihm, Jayon, Kramer, Melissa, McCarthy, Shane, Evans, Kathryn, Ghiban, Elena, Millar, J. Kirsty, Scotland, Generation, McIntosh, Andrew, Blackwood, Douglas, Lawrie, Stephen, Porteous, Dav

Journal:

European Neuropsychopharmacology

Year:

2019

Language:

english

File:

PDF, 35 KB

english, 2019

26

Identification and characterization of self-association domains on small ankyrin 1 isoforms

Subramaniam, Janani, Yang, Pu, McCarthy, Michael J., Cunha, Shane R.

Journal:

Journal of Molecular and Cellular Cardiology

Year:

2020

File:

PDF, 2.63 MB

2020

27

On the Emergence of Tremor in Prodromal Parkinsonâs Disease

Fearon, Conor, Lees, Andrew J., McKinley, John J., McCarthy, Allan, Smyth, Shane, Farrell, Michael, Lynch, Timothy

Journal:

Journal of Parkinson s Disease

Year:

2020

File:

PDF, 218 KB

2020

28

GOModeler-A tool for hypothesis-testing of functional genomics datasets

Prashanti Manda, McKinley G Freeman, Susan M Bridges, TJ Jankun-Kelly, Bindu Nanduri, Fiona M McCarthy, Shane C Burgess

Journal:

BMC Bioinformatics

Year:

2010

Language:

english

File:

PDF, 2.13 MB

english, 2010

29

AgBase: a functional genomics resource for agriculture

Fiona M McCarthy, Nan Wang, G Bryce Magee, Bindu Nanduri, Mark L Lawrence, Evelyn B Camon, Daniel G Barrell, David P Hill, Mary E Dolan, W Paul Williams, Dawn S Luthe, Susan M Bridges, Shane C Burgess

Journal:

Year:

2006

Language:

english

File:

PDF, 1.61 MB

english, 2006

30

Geophysical and hydrogeological characterisation of the impacts of on-site wastewater treatment discharge to groundwater in a poorly productive bedrock aquifer

Donohue, Shane, McCarthy, Valerie, Rafferty, Patrick, Orr, Alison, Flynn, Raymond

Journal:

Science of The Total Environment

Year:

2015

Language:

english

File:

PDF, 2.27 MB

english, 2015

31

Genetic and Pharmacologic Inactivation of ANGPTL3 and Cardiovascular Disease

Dewey, Frederick E., Gusarova, Viktoria, Dunbar, Richard L., O’Dushlaine, Colm, Schurmann, Claudia, Gottesman, Omri, McCarthy, Shane, Van Hout, Cristopher V., Bruse, Shannon, Dansky, Hayes M., Leader,

Journal:

New England Journal of Medicine

Year:

2017

Language:

english

File:

PDF, 548 KB

english, 2017

32

487. Clinical and Morphometric Predictors of Quality of Life at Three Year Longitudinal Follow up of a First Episode Psychosis Cohort

McInerney, Shane, Scanlon, Cathy, McFarland, John, Anderson-Schmidt, Heike, Cannon, Dara, McCarthy, Peter, Kenney, Joanne, Hallahan, Brian, McDonald, Colm

Journal:

Biological Psychiatry

Year:

2017

Language:

english

File:

PDF, 44 KB

english, 2017

33

Modeling the pasture-associated severe equine asthma bronchoalveolar lavage fluid proteome identifies molecular events mediating neutrophilic airway inflammation

Bright, Lauren A, Dittmar, Wellesley, Nanduri, Bindu, McCarthy, Fiona M, Mujahid, Nisma, Costa, Lais RR, Burgess, Shane C, Swiderski, Cyprianna E

Journal:

Veterinary Medicine Research and Reports

Year:

2019

File:

PDF, 1.04 MB

2019

34

S156. Progression of Subcortical Changes After First-Episode of Psychosis: A 3-Year Longitudinal Structural Magnetic Resonance Imaging Study

Akudjedu, Theophilus N., Tronchin, Giulia, Scanlon, Cathy, Kenney, Joanne, McInerney, Shane, McFarland, John, Barker, Gareth J., McCarthy, Peter, Cannon, Dara M., Hallahan, Brian, McDonald, Colm

Journal:

Biological Psychiatry

Year:

2019

Language:

english

File:

PDF, 45 KB

english, 2019

35

A haplotype-resolved, de novo genome assembly for the wood tiger moth (Arctia plantaginis) through trio binning

Yen, Eugenie C, McCarthy, Shane A, Galarza, Juan A, Generalovic, Tomas N, Pelan, Sarah, Nguyen, Petr, Meier, Joana I, Warren, Ian A, Mappes, Johanna, Durbin, Richard, Jiggins, Chris D

Journal:

Year:

2020

File:

PDF, 4.75 MB

2020

36

The chicken gene nomenclature committee report

David W Burt, Wilfrid Carrë, Mark Fell, Andy S Law, Parker B Antin, Donna R Maglott, Janet A Weber, Carl J Schmidt, Shane C Burgess, Fiona M McCarthy

Journal:

Year:

2009

Language:

english

File:

PDF, 190 KB

english, 2009

37

Multiscale deformation measurements using multispectral optical metrology

Mathew, Melvin, Ellenberg, Andrew, Esola, Shane, McCarthy, Matthew, Bartoli, Ivan, Kontsos, Antonios

Journal:

Structural Control and Health Monitoring

Year:

2018

Language:

english

File:

PDF, 1.01 MB

english, 2018

38

Re-Annotation Is an Essential Step in Systems Biology Modeling of Functional Genomics Data

van den Berg, Bart H. J., McCarthy, Fiona M., Lamont, Susan J., Burgess, Shane C., Friedberg, Iddo

Journal:

Year:

2010

Language:

english

File:

PDF, 425 KB

english, 2010

39

ArrayIDer: automated structural re-annotation pipeline for DNA microarrays

Bart HJ van den Berg, Jay H Konieczka, Fiona M McCarthy, Shane C Burgess

Journal:

BMC Bioinformatics

Year:

2009

Language:

english

File:

PDF, 385 KB

english, 2009

40

Characterization of molecular and cellular phenotypes associated with a heterozygous CNTNAP2 deletion using patient-derived hiPSC neural cells

Lee, Inkyu S, Carvalho, Claudia M B, Douvaras, Panagiotis, Ho, Seok-Man, Hartley, Brigham J, Zuccherato, Luciana W, Ladran, Ian G, Siegel, Arthur J, McCarthy, Shane, Malhotra, Dheeraj, Sebat, Jonathan

Journal:

npj Schizophrenia

Year:

2015

Language:

english

File:

PDF, 2.82 MB

english, 2015

41

Eccentric knee flexor strength profiles of 341 elite male academy and senior Gaelic football players: Do body mass and previous hamstring injury impact performance?

Roe, Mark, Malone, Shane, Delahunt, Eamonn, Collins, Kieran, Gissane, Conor, Persson, Ulrik McCarthy, Murphy, John C., Blake, Catherine

Journal:

Physical Therapy in Sport

Year:

2018

Language:

english

File:

PDF, 430 KB

english, 2018

42

SU93. Targeted Treatment of a Genetic Mutation in Glycine Decarboxylase With d-Cycloserine in Psychotic Disorders

Levy, Deborah, Coleman, Michael, Godfrey, Laura, Morgan, Charity, Sebat, Jonathan, Ongur, Dost, McCarthy, Shane, Malhotra, Dheeraj, Vuckovic, Alexander, Smith, Kamiell, Kirchhoff, Colette, Suckow, Ray

Journal:

Schizophrenia Bulletin

Year:

2017

Language:

english

File:

PDF, 74 KB

english, 2017

43

MAOA haplotypes associated with thrombocyte-MAO activity

Mårten Jansson, Shane McCarthy, Patrick F Sullivan, Paul Dickman, Björn Andersson, Lars Oreland, Martin Schalling, Nancy L Pedersen

Journal:

Year:

2005

Language:

english

File:

PDF, 1.28 MB

english, 2005

44

Genomic Duplication and Overexpression of TJP2/ZO-2 Leads to Altered Expression of Apoptosis Genes in Progressive Nonsyndromic Hearing Loss DFNA51

Tom Walsh, Sarah B. Pierce, Danielle R. Lenz, Zippora Brownstein, Orit Dagan-Rosenfeld, Hashem Shahin, Wendy Roeb, Shane McCarthy, Alex S. Nord, Carlos R. Gordon, Ziva Ben-Neriah, Jonathan Sebat, Moie

Journal:

The American Journal of Human Genetics

Year:

2010

Language:

english

File:

PDF, 1014 KB

english, 2010

45

Facilitating functional annotation of chicken microarray data

Teresia J Buza, Ranjit Kumar, Cathy R Gresham, Shane C Burgess, Fiona M McCarthy

Journal:

BMC Bioinformatics

Year:

2009

Language:

english

File:

PDF, 383 KB

english, 2009

46

Prediction of peptides observable by mass spectrometry applied at the experimental set level

William S Sanders, Susan M Bridges, Fiona M McCarthy, Bindu Nanduri, Shane C Burgess

Journal:

BMC Bioinformatics

Year:

2007

Language:

english

File:

PDF, 270 KB

english, 2007

47

Accurate all-electron correlation energies for the closed−shell atoms from Ar to Rn and their relationship to the corresponding MP2 correlation energies

McCarthy, Shane P., Thakkar, Ajit J.

Journal:

The Journal of Chemical Physics

Year:

2011

Language:

english

File:

PDF, 455 KB

english, 2011

48

Comparing the actions of lanicemine and ketamine in depression: key role of the anterior cingulate

Downey, Darragh, Dutta, Arpan, McKie, Shane, Dawson, Gerard R., Dourish, Colin T., Craig, Kevin, Smith, Mark A., McCarthy, Dennis J., Harmer, Catherine J., Goodwin, Guy M., Williams, Steve, Deakin, J.

Journal:

European Neuropsychopharmacology

Year:

2016

Language:

english

File:

PDF, 931 KB

english, 2016

49

Systemic response toCampylobacter jejuniinfection by profiling gene transcription in the spleens of two genetic lines of chickens

Xianyao Li, Christina L. Swaggerty, Michael H. Kogut, Hsin-I Chiang, Ying Wang, Kenneth J. Genovese, Haiqi He, Fiona M. McCarthy, Shane C. Burgess, Igal Y. Pevzner, Huaijun Zhou

Journal:

Year:

2012

Language:

english

File:

PDF, 303 KB

english, 2012

50

Reviews

Moran, Shane, McCarthy, Conor, Chrisman, Laura, Podar, Prem, Robinson, Jennifer, Meyer, Stephen

Journal:

Current Writing

Year:

1996

Language:

english

File:

PDF, 1.69 MB

english, 1996

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